Multi-Instance Prediction Tasks

Multi-instance prediction tasks involve predicting interactions between multiple entities, such as drug-target, drug-drug, and protein-protein interactions.

DTI

Drug-Target Interaction

Datasets (3):

• BindingDB_Kd
• DAVIS
• KIBA

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DDI

Drug-Drug Interaction

Datasets (2):

• DrugBank
• TWOSIDES

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PPI

Protein-Protein Interaction

Datasets (1):

• HuRI

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GDA

Gene-Disease Association

Datasets (1):

• DisGeNET

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DrugRes

Drug Response Prediction

Datasets (2):

• GDSC1
• GDSC2

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DrugSyn

Drug Synergy Prediction

Datasets (2):

• OncoPolyPharmacology
• DrugComb

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PeptideMHC

Peptide-MHC Binding

Datasets (2):

• MHC1_IEDB-IMGT_Nielsen
• MHC2_IEDB_Jensen

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AntibodyAFF

Antibody-Antigen Affinity

Datasets (1):

• Protein_SAbDab

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MTI

miRNA-Target Interaction

Datasets (1):

• miRTarBase

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Catalyst

Catalyst Prediction

Datasets (1):

• USPTO_Catalyst

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TCREpitopeBinding

TCR-Epitope Binding

Datasets (1):

• weber

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TrialOutcome

Clinical Trial Outcome Prediction

Datasets (1):

• TOP

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ProteinPeptide

Protein-Peptide Interaction

Datasets (1):

• brown_mdm2_ace2_12ca5

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PerturbOutcome

Counterfactual Prediction

Datasets (1):

• scperturb

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scDTI

Single-cell Drug-Target Interaction

Datasets (1):

• opentargets_dti

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